Cluster: HRGMv2_0360_CGC51
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0360
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0360_1 | HRGMv2_0360_1_2183 | 2670238 | 2673447 | + | 1.B.14.6.2 |
| TC | HRGMv2_0360_1 | HRGMv2_0360_1_2184 | 2673476 | 2674990 | + | 8.A.46.2.2 |
| CAZyme | HRGMv2_0360_1 | HRGMv2_0360_1_2185 | 2681862 | 2683190 | + | GH29 |
Gene ID: HRGMv2_0360_1_2183
Type: TC
Location: 2670238 - 2673447 (+)
Type: TC
Location: 2670238 - 2673447 (+)
Gene ID: HRGMv2_0360_1_2184
Type: TC
Location: 2673476 - 2674990 (+)
Type: TC
Location: 2673476 - 2674990 (+)
Gene ID: HRGMv2_0360_1_2185
Type: CAZyme
Location: 2681862 - 2683190 (+)
Type: CAZyme
Location: 2681862 - 2683190 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola mediterraneensis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.