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Cluster: HRGMv2_0360_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0360_1 HRGMv2_0360_1_122 153322 154212 - GH73
pfam HRGMv2_0360_1 HRGMv2_0360_1_123 154358 154840 + dCMP_cyt_deam_1 | dCMP_cyt_deam_2
TC HRGMv2_0360_1 HRGMv2_0360_1_124 154976 156595 - 3.A.1.121.4
TF HRGMv2_0360_1 HRGMv2_0360_1_125 156692 157450 - LytTR
TC HRGMv2_0360_1 HRGMv2_0360_1_126 157452 158495 - 8.A.59.2.1
pfam HRGMv2_0360_1 HRGMv2_0360_1_127 158505 159422 - HlyD_3 | HlyD_D23
TC HRGMv2_0360_1 HRGMv2_0360_1_128 159443 163783 - 2.A.6.1.5
NULL(UNKNOWN) HRGMv2_0360_1 HRGMv2_0360_1_129 163941 164063 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0360_1 HRGMv2_0360_1_130 164060 164677 + 3.A.8.1.1
Gene ID: HRGMv2_0360_1_122
Type: CAZyme
Location: 153322 - 154212 (-)
Gene ID: HRGMv2_0360_1_123
Type: pfam
Location: 154358 - 154840 (+)
Gene ID: HRGMv2_0360_1_124
Type: TC
Location: 154976 - 156595 (-)
Gene ID: HRGMv2_0360_1_125
Type: TF
Location: 156692 - 157450 (-)
Gene ID: HRGMv2_0360_1_126
Type: TC
Location: 157452 - 158495 (-)
Gene ID: HRGMv2_0360_1_127
Type: pfam
Location: 158505 - 159422 (-)
Gene ID: HRGMv2_0360_1_128
Type: TC
Location: 159443 - 163783 (-)
Gene ID: HRGMv2_0360_1_129
Type:
Location: 163941 - 164063 (+)
Gene ID: HRGMv2_0360_1_130
Type: TC
Location: 164060 - 164677 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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