dbCAN HGM

Cluster: HRGMv2_0360_CGC44

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_0360_1	HRGMv2_0360_1_1965	2375743	2377284	-	2.A.47.4.5
pfam	HRGMv2_0360_1	HRGMv2_0360_1_1966	2377297	2378106	-	Inositol_P
TC	HRGMv2_0360_1	HRGMv2_0360_1_1967	2378203	2379885	-	2.A.3.3.22
pfam	HRGMv2_0360_1	HRGMv2_0360_1_1968	2379939	2381261	-	OEP \| OEP
TC	HRGMv2_0360_1	HRGMv2_0360_1_1969	2381258	2384290	-	2.A.6.2.33
TC	HRGMv2_0360_1	HRGMv2_0360_1_1970	2384302	2385378	-	2.A.6.2.28
NULL(UNKNOWN)	HRGMv2_0360_1	HRGMv2_0360_1_1971	2385422	2385532	+	NULL(UNKNOWN) [View Structural Homologs]
TC	HRGMv2_0360_1	HRGMv2_0360_1_1972	2386071	2389301	+	1.B.14.6.1
pfam	HRGMv2_0360_1	HRGMv2_0360_1_1973	2389321	2391138	+	SusD_RagB \| SusD-like_3
CAZyme	HRGMv2_0360_1	HRGMv2_0360_1_1974	2391315	2392295	+	GH43_31

Gene ID: HRGMv2_0360_1_1965
Type: TC
Location: 2375743 - 2377284 (-)

Gene ID: HRGMv2_0360_1_1966
Type: pfam
Location: 2377297 - 2378106 (-)

Gene ID: HRGMv2_0360_1_1967
Type: TC
Location: 2378203 - 2379885 (-)

Gene ID: HRGMv2_0360_1_1968
Type: pfam
Location: 2379939 - 2381261 (-)

Gene ID: HRGMv2_0360_1_1969
Type: TC
Location: 2381258 - 2384290 (-)

Gene ID: HRGMv2_0360_1_1970
Type: TC
Location: 2384302 - 2385378 (-)

Gene ID: HRGMv2_0360_1_1971
Type:
Location: 2385422 - 2385532 (+)

Gene ID: HRGMv2_0360_1_1972
Type: TC
Location: 2386071 - 2389301 (+)

Gene ID: HRGMv2_0360_1_1973
Type: pfam
Location: 2389321 - 2391138 (+)

Gene ID: HRGMv2_0360_1_1974
Type: CAZyme
Location: 2391315 - 2392295 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.