dbCAN HGM

Cluster: HRGMv2_0360_CGC42

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	HRGMv2_0360_1	HRGMv2_0360_1_1890	2284031	2286280	-	GH3
pfam	HRGMv2_0360_1	HRGMv2_0360_1_1891	2286885	2287976	+	AA_kinase \| PUA
CAZyme	HRGMv2_0360_1	HRGMv2_0360_1_1892	2287990	2289126	-	GH109
NULL(UNKNOWN)	HRGMv2_0360_1	HRGMv2_0360_1_1893	2289158	2289547	-	NULL(UNKNOWN) [View Structural Homologs]
TF	HRGMv2_0360_1	HRGMv2_0360_1_1894	2289641	2290195	+	HTH_3
TC	HRGMv2_0360_1	HRGMv2_0360_1_1895	2290217	2291872	+	2.A.1.42.2
pfam	HRGMv2_0360_1	HRGMv2_0360_1_1896	2291940	2292827	-	NAD_kinase \| NAD_kinase_C
pfam	HRGMv2_0360_1	HRGMv2_0360_1_1897	2293018	2293731	+	PdxJ
TC	HRGMv2_0360_1	HRGMv2_0360_1_1898	2293735	2294454	+	1.A.30.2.9

Gene ID: HRGMv2_0360_1_1890
Type: CAZyme
Location: 2284031 - 2286280 (-)

Gene ID: HRGMv2_0360_1_1891
Type: pfam
Location: 2286885 - 2287976 (+)

Gene ID: HRGMv2_0360_1_1892
Type: CAZyme
Location: 2287990 - 2289126 (-)

Gene ID: HRGMv2_0360_1_1893
Type:
Location: 2289158 - 2289547 (-)

Gene ID: HRGMv2_0360_1_1894
Type: TF
Location: 2289641 - 2290195 (+)

Gene ID: HRGMv2_0360_1_1895
Type: TC
Location: 2290217 - 2291872 (+)

Gene ID: HRGMv2_0360_1_1896
Type: pfam
Location: 2291940 - 2292827 (-)

Gene ID: HRGMv2_0360_1_1897
Type: pfam
Location: 2293018 - 2293731 (+)

Gene ID: HRGMv2_0360_1_1898
Type: TC
Location: 2293735 - 2294454 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.