Cluster: HRGMv2_0360_CGC41
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0360
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0360_1 | HRGMv2_0360_1_1884 | 2272434 | 2274857 | - | 1.B.14.3.1 |
| pfam | HRGMv2_0360_1 | HRGMv2_0360_1_1885 | 2275032 | 2275814 | - | S6PP | Hydrolase_3 |
| CAZyme | HRGMv2_0360_1 | HRGMv2_0360_1_1886 | 2275931 | 2276770 | - | GH16_3 |
Gene ID: HRGMv2_0360_1_1884
Type: TC
Location: 2272434 - 2274857 (-)
Type: TC
Location: 2272434 - 2274857 (-)
Gene ID: HRGMv2_0360_1_1885
Type: pfam
Location: 2275032 - 2275814 (-)
Type: pfam
Location: 2275032 - 2275814 (-)
Gene ID: HRGMv2_0360_1_1886
Type: CAZyme
Location: 2275931 - 2276770 (-)
Type: CAZyme
Location: 2275931 - 2276770 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola mediterraneensis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.