Cluster: HRGMv2_0360_CGC38
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0360
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0360_1 | HRGMv2_0360_1_1798 | 2156998 | 2158692 | + | 2.A.58.2.2 |
| CAZyme | HRGMv2_0360_1 | HRGMv2_0360_1_1799 | 2158774 | 2160552 | - | GH110 |
| TC | HRGMv2_0360_1 | HRGMv2_0360_1_1800 | 2160886 | 2163927 | + | 1.B.14.6.1 |
| TC | HRGMv2_0360_1 | HRGMv2_0360_1_1801 | 2163954 | 2165753 | + | 8.A.46.1.5 |
Gene ID: HRGMv2_0360_1_1798
Type: TC
Location: 2156998 - 2158692 (+)
Type: TC
Location: 2156998 - 2158692 (+)
Gene ID: HRGMv2_0360_1_1799
Type: CAZyme
Location: 2158774 - 2160552 (-)
Type: CAZyme
Location: 2158774 - 2160552 (-)
Gene ID: HRGMv2_0360_1_1800
Type: TC
Location: 2160886 - 2163927 (+)
Type: TC
Location: 2160886 - 2163927 (+)
Gene ID: HRGMv2_0360_1_1801
Type: TC
Location: 2163954 - 2165753 (+)
Type: TC
Location: 2163954 - 2165753 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola mediterraneensis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.