dbCAN HGM

Cluster: HRGMv2_0360_CGC35

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_0360_1	HRGMv2_0360_1_1585	1901520	1904555	+	1.B.14.6.1
TC	HRGMv2_0360_1	HRGMv2_0360_1_1586	1904569	1906266	+	8.A.46.1.3
CAZyme	HRGMv2_0360_1	HRGMv2_0360_1_1587	1906353	1907957	+	GH30_4
CAZyme	HRGMv2_0360_1	HRGMv2_0360_1_1588	1907975	1910389	+	GH2
pfam	HRGMv2_0360_1	HRGMv2_0360_1_1589	1910582	1911067	-	LuxS
pfam	HRGMv2_0360_1	HRGMv2_0360_1_1590	1911074	1911769	-	PNP_UDP_1
TC	HRGMv2_0360_1	HRGMv2_0360_1_1591	1911860	1914352	+	9.B.144.1.4
CAZyme	HRGMv2_0360_1	HRGMv2_0360_1_1592	1914396	1915169	-	GT2
CAZyme	HRGMv2_0360_1	HRGMv2_0360_1_1593	1915162	1916424	-	GT4
CAZyme	HRGMv2_0360_1	HRGMv2_0360_1_1594	1916452	1917528	-	GT4

Gene ID: HRGMv2_0360_1_1585
Type: TC
Location: 1901520 - 1904555 (+)

Gene ID: HRGMv2_0360_1_1586
Type: TC
Location: 1904569 - 1906266 (+)

Gene ID: HRGMv2_0360_1_1587
Type: CAZyme
Location: 1906353 - 1907957 (+)

Gene ID: HRGMv2_0360_1_1588
Type: CAZyme
Location: 1907975 - 1910389 (+)

Gene ID: HRGMv2_0360_1_1589
Type: pfam
Location: 1910582 - 1911067 (-)

Gene ID: HRGMv2_0360_1_1590
Type: pfam
Location: 1911074 - 1911769 (-)

Gene ID: HRGMv2_0360_1_1591
Type: TC
Location: 1911860 - 1914352 (+)

Gene ID: HRGMv2_0360_1_1592
Type: CAZyme
Location: 1914396 - 1915169 (-)

Gene ID: HRGMv2_0360_1_1593
Type: CAZyme
Location: 1915162 - 1916424 (-)

Gene ID: HRGMv2_0360_1_1594
Type: CAZyme
Location: 1916452 - 1917528 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.