Cluster: HRGMv2_0360_CGC33
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0360
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0360_1 | HRGMv2_0360_1_1483 | 1779623 | 1780741 | - | GT1 |
| pfam | HRGMv2_0360_1 | HRGMv2_0360_1_1484 | 1780738 | 1781547 | - | Metallophos |
| NULL(UNKNOWN) | HRGMv2_0360_1 | HRGMv2_0360_1_1485 | 1781740 | 1781931 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0360_1 | HRGMv2_0360_1_1486 | 1782028 | 1782612 | - | 2.A.124.1.4 |
Gene ID: HRGMv2_0360_1_1483
Type: CAZyme
Location: 1779623 - 1780741 (-)
Type: CAZyme
Location: 1779623 - 1780741 (-)
Gene ID: HRGMv2_0360_1_1484
Type: pfam
Location: 1780738 - 1781547 (-)
Type: pfam
Location: 1780738 - 1781547 (-)
Gene ID: HRGMv2_0360_1_1485
Type:
Location: 1781740 - 1781931 (-)
Type:
Location: 1781740 - 1781931 (-)
Gene ID: HRGMv2_0360_1_1486
Type: TC
Location: 1782028 - 1782612 (-)
Type: TC
Location: 1782028 - 1782612 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola mediterraneensis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.