dbCAN HGM

Cluster: HRGMv2_0360_CGC26

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_0360_1	HRGMv2_0360_1_1350	1589066	1590316	-	2.A.1.7.1
pfam	HRGMv2_0360_1	HRGMv2_0360_1_1351	1590335	1591255	-	Amidohydro_2
TC	HRGMv2_0360_1	HRGMv2_0360_1_1352	1591270	1592202	-	8.A.5.1.6
pfam	HRGMv2_0360_1	HRGMv2_0360_1_1353	1592214	1592564	-	rhaM
CAZyme	HRGMv2_0360_1	HRGMv2_0360_1_1354	1592599	1594242	-	GH29
TF	HRGMv2_0360_1	HRGMv2_0360_1_1355	1594447	1595301	+	HTH_AraC \| HTH_AraC
TC	HRGMv2_0360_1	HRGMv2_0360_1_1356	1595317	1597005	-	8.A.46.1.5
TC	HRGMv2_0360_1	HRGMv2_0360_1_1357	1597026	1600103	-	1.B.14.6.1
CAZyme	HRGMv2_0360_1	HRGMv2_0360_1_1358	1600350	1602239	-	GH97

Gene ID: HRGMv2_0360_1_1350
Type: TC
Location: 1589066 - 1590316 (-)

Gene ID: HRGMv2_0360_1_1351
Type: pfam
Location: 1590335 - 1591255 (-)

Gene ID: HRGMv2_0360_1_1352
Type: TC
Location: 1591270 - 1592202 (-)

Gene ID: HRGMv2_0360_1_1353
Type: pfam
Location: 1592214 - 1592564 (-)

Gene ID: HRGMv2_0360_1_1354
Type: CAZyme
Location: 1592599 - 1594242 (-)

Gene ID: HRGMv2_0360_1_1355
Type: TF
Location: 1594447 - 1595301 (+)

Gene ID: HRGMv2_0360_1_1356
Type: TC
Location: 1595317 - 1597005 (-)

Gene ID: HRGMv2_0360_1_1357
Type: TC
Location: 1597026 - 1600103 (-)

Gene ID: HRGMv2_0360_1_1358
Type: CAZyme
Location: 1600350 - 1602239 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.