dbCAN HGM

Cluster: HRGMv2_0360_CGC24

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_0360_1	HRGMv2_0360_1_1218	1455686	1457077	+	4.A.5.1.4
pfam	HRGMv2_0360_1	HRGMv2_0360_1_1219	1457101	1458021	+	KduI
TC	HRGMv2_0360_1	HRGMv2_0360_1_1220	1458255	1459679	+	2.A.1.14.25
STP	HRGMv2_0360_1	HRGMv2_0360_1_1221	1459745	1461802	-	HD
pfam	HRGMv2_0360_1	HRGMv2_0360_1_1222	1461888	1463405	+	tRNA-synt_1c \| Anticodon_2
CAZyme	HRGMv2_0360_1	HRGMv2_0360_1_1223	1463414	1464634	+	GT30
TF	HRGMv2_0360_1	HRGMv2_0360_1_1224	1464924	1465304	-	GntR
NULL(UNKNOWN)	HRGMv2_0360_1	HRGMv2_0360_1_1225	1465301	1466182	-	NULL(UNKNOWN) [View Structural Homologs]
TC	HRGMv2_0360_1	HRGMv2_0360_1_1226	1466196	1467035	-	3.A.1.132.6

Gene ID: HRGMv2_0360_1_1218
Type: TC
Location: 1455686 - 1457077 (+)

Gene ID: HRGMv2_0360_1_1219
Type: pfam
Location: 1457101 - 1458021 (+)

Gene ID: HRGMv2_0360_1_1220
Type: TC
Location: 1458255 - 1459679 (+)

Gene ID: HRGMv2_0360_1_1221
Type: STP
Location: 1459745 - 1461802 (-)

Gene ID: HRGMv2_0360_1_1222
Type: pfam
Location: 1461888 - 1463405 (+)

Gene ID: HRGMv2_0360_1_1223
Type: CAZyme
Location: 1463414 - 1464634 (+)

Gene ID: HRGMv2_0360_1_1224
Type: TF
Location: 1464924 - 1465304 (-)

Gene ID: HRGMv2_0360_1_1225
Type:
Location: 1465301 - 1466182 (-)

Gene ID: HRGMv2_0360_1_1226
Type: TC
Location: 1466196 - 1467035 (-)

Taxonomic Lineage

Domain

→

Phylum

→

Class

→

Order

→

Family

→

Genus

→

Species

Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.