dbCAN HGM

Cluster: HRGMv2_0360_CGC22

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	HRGMv2_0360_1	HRGMv2_0360_1_1173	1382850	1384016	+	CE9
CAZyme	HRGMv2_0360_1	HRGMv2_0360_1_1174	1384038	1385207	+	CE9
NULL(UNKNOWN)	HRGMv2_0360_1	HRGMv2_0360_1_1175	1389084	1389248	+	NULL(UNKNOWN) [View Structural Homologs]
NULL(UNKNOWN)	HRGMv2_0360_1	HRGMv2_0360_1_1176	1391349	1391594	+	NULL(UNKNOWN) [View Structural Homologs]
TC	HRGMv2_0360_1	HRGMv2_0360_1_1177	1392119	1393420	-	2.A.109.2.3
TC	HRGMv2_0360_1	HRGMv2_0360_1_1178	1393570	1394571	-	8.A.5.1.3
TC	HRGMv2_0360_1	HRGMv2_0360_1_1179	1394727	1396586	-	3.A.16.1.2
NULL(UNKNOWN)	HRGMv2_0360_1	HRGMv2_0360_1_1180	1396817	1397044	+	NULL(UNKNOWN) [View Structural Homologs]
TC	HRGMv2_0360_1	HRGMv2_0360_1_1181	1397276	1400470	+	1.B.14.6.1

Gene ID: HRGMv2_0360_1_1173
Type: CAZyme
Location: 1382850 - 1384016 (+)

Gene ID: HRGMv2_0360_1_1174
Type: CAZyme
Location: 1384038 - 1385207 (+)

Gene ID: HRGMv2_0360_1_1175
Type:
Location: 1389084 - 1389248 (+)

Gene ID: HRGMv2_0360_1_1176
Type:
Location: 1391349 - 1391594 (+)

Gene ID: HRGMv2_0360_1_1177
Type: TC
Location: 1392119 - 1393420 (-)

Gene ID: HRGMv2_0360_1_1178
Type: TC
Location: 1393570 - 1394571 (-)

Gene ID: HRGMv2_0360_1_1179
Type: TC
Location: 1394727 - 1396586 (-)

Gene ID: HRGMv2_0360_1_1180
Type:
Location: 1396817 - 1397044 (+)

Gene ID: HRGMv2_0360_1_1181
Type: TC
Location: 1397276 - 1400470 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.