Cluster: HRGMv2_0360_CGC20
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0360
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0360_1 | HRGMv2_0360_1_1131 | 1333892 | 1335706 | - | 4.C.1.1.14 |
| peptidase | HRGMv2_0360_1 | HRGMv2_0360_1_1132 | 1335831 | 1336895 | + | M20.016 |
| CAZyme | HRGMv2_0360_1 | HRGMv2_0360_1_1133 | 1336963 | 1340778 | - | GH31_18 |
Gene ID: HRGMv2_0360_1_1131
Type: TC
Location: 1333892 - 1335706 (-)
Type: TC
Location: 1333892 - 1335706 (-)
Gene ID: HRGMv2_0360_1_1132
Type: peptidase
Location: 1335831 - 1336895 (+)
Type: peptidase
Location: 1335831 - 1336895 (+)
Gene ID: HRGMv2_0360_1_1133
Type: CAZyme
Location: 1336963 - 1340778 (-)
Type: CAZyme
Location: 1336963 - 1340778 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola mediterraneensis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.