dbCAN HGM

Cluster: HRGMv2_0360_CGC18

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_0360_1	HRGMv2_0360_1_1061	1252080	1252853	-	3.A.1.27.4
TC	HRGMv2_0360_1	HRGMv2_0360_1_1062	1252850	1253593	-	3.A.1.27.2
TC	HRGMv2_0360_1	HRGMv2_0360_1_1063	1253733	1254551	+	1.B.42.1.2
pfam	HRGMv2_0360_1	HRGMv2_0360_1_1064	1254650	1255846	-	SusE \| SusF_SusE
TC	HRGMv2_0360_1	HRGMv2_0360_1_1065	1255833	1257500	-	8.A.46.1.1
TC	HRGMv2_0360_1	HRGMv2_0360_1_1066	1257522	1260539	-	1.B.14.6.1
CAZyme	HRGMv2_0360_1	HRGMv2_0360_1_1067	1260615	1262795	-	GH97
CAZyme	HRGMv2_0360_1	HRGMv2_0360_1_1068	1262973	1264826	-	GH13_46
pfam	HRGMv2_0360_1	HRGMv2_0360_1_1069	1265004	1266599	+	DUF6377
pfam	HRGMv2_0360_1	HRGMv2_0360_1_1070	1266762	1268711	-	SusD_RagB \| SusD-like_3
TC	HRGMv2_0360_1	HRGMv2_0360_1_1071	1268734	1271973	-	1.B.14.6.1

Gene ID: HRGMv2_0360_1_1061
Type: TC
Location: 1252080 - 1252853 (-)

Gene ID: HRGMv2_0360_1_1062
Type: TC
Location: 1252850 - 1253593 (-)

Gene ID: HRGMv2_0360_1_1063
Type: TC
Location: 1253733 - 1254551 (+)

Gene ID: HRGMv2_0360_1_1064
Type: pfam
Location: 1254650 - 1255846 (-)

Gene ID: HRGMv2_0360_1_1065
Type: TC
Location: 1255833 - 1257500 (-)

Gene ID: HRGMv2_0360_1_1066
Type: TC
Location: 1257522 - 1260539 (-)

Gene ID: HRGMv2_0360_1_1067
Type: CAZyme
Location: 1260615 - 1262795 (-)

Gene ID: HRGMv2_0360_1_1068
Type: CAZyme
Location: 1262973 - 1264826 (-)

Gene ID: HRGMv2_0360_1_1069
Type: pfam
Location: 1265004 - 1266599 (+)

Gene ID: HRGMv2_0360_1_1070
Type: pfam
Location: 1266762 - 1268711 (-)

Gene ID: HRGMv2_0360_1_1071
Type: TC
Location: 1268734 - 1271973 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.