Cluster: HRGMv2_0360_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0360
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0360_1 | HRGMv2_0360_1_511 | 608911 | 610959 | - | CBM9 |
| CAZyme | HRGMv2_0360_1 | HRGMv2_0360_1_512 | 610971 | 612317 | - | GH29 |
| pfam | HRGMv2_0360_1 | HRGMv2_0360_1_513 | 612501 | 614465 | - | SusD-like | SusD-like | SusD-like_2 | SusD-like_2 |
| TC | HRGMv2_0360_1 | HRGMv2_0360_1_514 | 614485 | 617637 | - | 1.B.14.6.13 |
Gene ID: HRGMv2_0360_1_511
Type: CAZyme
Location: 608911 - 610959 (-)
Type: CAZyme
Location: 608911 - 610959 (-)
Gene ID: HRGMv2_0360_1_512
Type: CAZyme
Location: 610971 - 612317 (-)
Type: CAZyme
Location: 610971 - 612317 (-)
Gene ID: HRGMv2_0360_1_513
Type: pfam
Location: 612501 - 614465 (-)
Type: pfam
Location: 612501 - 614465 (-)
Gene ID: HRGMv2_0360_1_514
Type: TC
Location: 614485 - 617637 (-)
Type: TC
Location: 614485 - 617637 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola mediterraneensis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.