Cluster: HRGMv2_0356_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0356
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0356_1 | HRGMv2_0356_1_192 | 231130 | 236325 | - | 1.B.79.1.2 |
| pfam | HRGMv2_0356_1 | HRGMv2_0356_1_193 | 236446 | 236832 | - | C_GCAxxG_C_C |
| pfam | HRGMv2_0356_1 | HRGMv2_0356_1_194 | 237171 | 238496 | + | OEP | OEP |
| TC | HRGMv2_0356_1 | HRGMv2_0356_1_195 | 238493 | 239527 | + | 8.A.1.1.2 |
| NULL(UNKNOWN) | HRGMv2_0356_1 | HRGMv2_0356_1_196 | 239529 | 241121 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0356_1 | HRGMv2_0356_1_197 | 241151 | 242185 | - | GH43_24 |
Gene ID: HRGMv2_0356_1_192
Type: TC
Location: 231130 - 236325 (-)
Type: TC
Location: 231130 - 236325 (-)
Gene ID: HRGMv2_0356_1_193
Type: pfam
Location: 236446 - 236832 (-)
Type: pfam
Location: 236446 - 236832 (-)
Gene ID: HRGMv2_0356_1_194
Type: pfam
Location: 237171 - 238496 (+)
Type: pfam
Location: 237171 - 238496 (+)
Gene ID: HRGMv2_0356_1_195
Type: TC
Location: 238493 - 239527 (+)
Type: TC
Location: 238493 - 239527 (+)
Gene ID: HRGMv2_0356_1_196
Type:
Location: 239529 - 241121 (+)
Type:
Location: 239529 - 241121 (+)
Gene ID: HRGMv2_0356_1_197
Type: CAZyme
Location: 241151 - 242185 (-)
Type: CAZyme
Location: 241151 - 242185 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Species
Lepagella sp900549375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.