Cluster: HRGMv2_0356_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0356
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0356_9 | HRGMv2_0356_9_67 | 74407 | 77550 | + | 1.B.14.6.1 |
| pfam | HRGMv2_0356_9 | HRGMv2_0356_9_68 | 77584 | 79101 | + | SusD_RagB | SusD-like_3 |
| NULL(UNKNOWN) | HRGMv2_0356_9 | HRGMv2_0356_9_69 | 79150 | 80514 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0356_9 | HRGMv2_0356_9_70 | 80601 | 81740 | + | GH16_3 |
| CAZyme | HRGMv2_0356_9 | HRGMv2_0356_9_71 | 81757 | 83997 | + | GH3 |
| CAZyme | HRGMv2_0356_9 | HRGMv2_0356_9_72 | 83994 | 86288 | + | GH3 |
Gene ID: HRGMv2_0356_9_67
Type: TC
Location: 74407 - 77550 (+)
Type: TC
Location: 74407 - 77550 (+)
Gene ID: HRGMv2_0356_9_68
Type: pfam
Location: 77584 - 79101 (+)
Type: pfam
Location: 77584 - 79101 (+)
Gene ID: HRGMv2_0356_9_69
Type:
Location: 79150 - 80514 (+)
Type:
Location: 79150 - 80514 (+)
Gene ID: HRGMv2_0356_9_70
Type: CAZyme
Location: 80601 - 81740 (+)
Type: CAZyme
Location: 80601 - 81740 (+)
Gene ID: HRGMv2_0356_9_71
Type: CAZyme
Location: 81757 - 83997 (+)
Type: CAZyme
Location: 81757 - 83997 (+)
Gene ID: HRGMv2_0356_9_72
Type: CAZyme
Location: 83994 - 86288 (+)
Type: CAZyme
Location: 83994 - 86288 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Species
Lepagella sp900549375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.