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Cluster: HRGMv2_0354_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0354_14 HRGMv2_0354_14_51 45933 48392 - GH51_2
pfam HRGMv2_0354_14 HRGMv2_0354_14_52 48447 49853 - Alk_phosphatase | Alk_phosphatase
TC HRGMv2_0354_14 HRGMv2_0354_14_53 49999 51351 + 2.A.66.1.25
CAZyme HRGMv2_0354_14 HRGMv2_0354_14_54 51403 52413 - GH5_2
pfam HRGMv2_0354_14 HRGMv2_0354_14_55 52444 53142 - Lipase_GDSL_lke
NULL(UNKNOWN) HRGMv2_0354_14 HRGMv2_0354_14_56 53159 53875 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0354_14 HRGMv2_0354_14_57 54038 55585 - GH51_1
TC HRGMv2_0354_14 HRGMv2_0354_14_58 56015 57778 + 2.A.81.1.1
STP HRGMv2_0354_14 HRGMv2_0354_14_59 57803 59437 + Aminotran_1_2
CAZyme HRGMv2_0354_14 HRGMv2_0354_14_60 59544 62633 - GH95
Gene ID: HRGMv2_0354_14_51
Type: CAZyme
Location: 45933 - 48392 (-)
Gene ID: HRGMv2_0354_14_52
Type: pfam
Location: 48447 - 49853 (-)
Gene ID: HRGMv2_0354_14_53
Type: TC
Location: 49999 - 51351 (+)
Gene ID: HRGMv2_0354_14_54
Type: CAZyme
Location: 51403 - 52413 (-)
Gene ID: HRGMv2_0354_14_55
Type: pfam
Location: 52444 - 53142 (-)
Gene ID: HRGMv2_0354_14_56
Type:
Location: 53159 - 53875 (-)
Gene ID: HRGMv2_0354_14_57
Type: CAZyme
Location: 54038 - 55585 (-)
Gene ID: HRGMv2_0354_14_58
Type: TC
Location: 56015 - 57778 (+)
Gene ID: HRGMv2_0354_14_59
Type: STP
Location: 57803 - 59437 (+)
Gene ID: HRGMv2_0354_14_60
Type: CAZyme
Location: 59544 - 62633 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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