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Cluster: HRGMv2_0354_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0354_9 HRGMv2_0354_9_59 69682 71760 + CBM91 | GH43_10
TC HRGMv2_0354_9 HRGMv2_0354_9_60 71778 73220 - 2.A.49.5.3
CAZyme HRGMv2_0354_9 HRGMv2_0354_9_61 73240 75183 - GH13_46
NULL(UNKNOWN) HRGMv2_0354_9 HRGMv2_0354_9_62 75437 77482 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0354_9 HRGMv2_0354_9_63 77518 79632 + UvrD-helicase | AAA_19 | UvrD_C | UvrD_C_2
CAZyme HRGMv2_0354_9 HRGMv2_0354_9_64 79704 81716 + GH13_14
TC HRGMv2_0354_9 HRGMv2_0354_9_65 81921 83171 + 2.A.6.2.20
TC HRGMv2_0354_9 HRGMv2_0354_9_66 83178 83852 + 3.A.1.122.2
TC HRGMv2_0354_9 HRGMv2_0354_9_67 83928 85211 + 3.A.1.122.1
Gene ID: HRGMv2_0354_9_59
Type: CAZyme
Location: 69682 - 71760 (+)
Gene ID: HRGMv2_0354_9_60
Type: TC
Location: 71778 - 73220 (-)
Gene ID: HRGMv2_0354_9_61
Type: CAZyme
Location: 73240 - 75183 (-)
Gene ID: HRGMv2_0354_9_62
Type:
Location: 75437 - 77482 (+)
Gene ID: HRGMv2_0354_9_63
Type: pfam
Location: 77518 - 79632 (+)
Gene ID: HRGMv2_0354_9_64
Type: CAZyme
Location: 79704 - 81716 (+)
Gene ID: HRGMv2_0354_9_65
Type: TC
Location: 81921 - 83171 (+)
Gene ID: HRGMv2_0354_9_66
Type: TC
Location: 83178 - 83852 (+)
Gene ID: HRGMv2_0354_9_67
Type: TC
Location: 83928 - 85211 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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