dbCAN Logo

Cluster: HRGMv2_0353_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0353_3 HRGMv2_0353_3_57 74577 75926 + 9.A.40.1.2
NULL(UNKNOWN) HRGMv2_0353_3 HRGMv2_0353_3_58 75926 76540 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0353_3 HRGMv2_0353_3_59 76537 77025 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0353_3 HRGMv2_0353_3_60 77037 77414 + 2.A.7.34.3
pfam HRGMv2_0353_3 HRGMv2_0353_3_61 77518 78030 - LTXXQ
CAZyme HRGMv2_0353_3 HRGMv2_0353_3_62 78129 79079 - GT2
TC HRGMv2_0353_3 HRGMv2_0353_3_63 79233 79988 - 3.D.10.1.5
TC HRGMv2_0353_3 HRGMv2_0353_3_64 80094 82121 - 3.D.10.1.5
TC HRGMv2_0353_3 HRGMv2_0353_3_65 82161 83063 - 3.D.10.1.5
Gene ID: HRGMv2_0353_3_57
Type: TC
Location: 74577 - 75926 (+)
Gene ID: HRGMv2_0353_3_58
Type:
Location: 75926 - 76540 (+)
Gene ID: HRGMv2_0353_3_59
Type:
Location: 76537 - 77025 (+)
Gene ID: HRGMv2_0353_3_60
Type: TC
Location: 77037 - 77414 (+)
Gene ID: HRGMv2_0353_3_61
Type: pfam
Location: 77518 - 78030 (-)
Gene ID: HRGMv2_0353_3_62
Type: CAZyme
Location: 78129 - 79079 (-)
Gene ID: HRGMv2_0353_3_63
Type: TC
Location: 79233 - 79988 (-)
Gene ID: HRGMv2_0353_3_64
Type: TC
Location: 80094 - 82121 (-)
Gene ID: HRGMv2_0353_3_65
Type: TC
Location: 82161 - 83063 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List