Cluster: HRGMv2_0353_CGC5
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0353
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0353_1 | HRGMv2_0353_1_286 | 343296 | 344285 | - | GT2 |
| pfam | HRGMv2_0353_1 | HRGMv2_0353_1_287 | 344278 | 345177 | - | Lip_A_acyltrans |
| pfam | HRGMv2_0353_1 | HRGMv2_0353_1_288 | 345174 | 346508 | - | UPF0004 | Radical_SAM |
| CAZyme | HRGMv2_0353_1 | HRGMv2_0353_1_289 | 346505 | 348547 | - | GH13_8 |
| pfam | HRGMv2_0353_1 | HRGMv2_0353_1_290 | 348706 | 349410 | - | OMP_b-brl_2 |
| CAZyme | HRGMv2_0353_1 | HRGMv2_0353_1_291 | 349398 | 351326 | - | CBM50 |
| NULL(UNKNOWN) | HRGMv2_0353_1 | HRGMv2_0353_1_292 | 351428 | 351928 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0353_1 | HRGMv2_0353_1_293 | 351917 | 352879 | - | EamA | EamA |
| TC | HRGMv2_0353_1 | HRGMv2_0353_1_294 | 353108 | 353806 | + | 9.B.186.1.3 |
| STP | HRGMv2_0353_1 | HRGMv2_0353_1_295 | 353847 | 354707 | - | Sigma70_r2 | Sigma70_r3 | Sigma70_r4 |
| pfam | HRGMv2_0353_1 | HRGMv2_0353_1_296 | 354891 | 356198 | - | ABC2_membrane_3 |
| TC | HRGMv2_0353_1 | HRGMv2_0353_1_297 | 356195 | 357142 | - | 3.A.1.128.7 |
| STP | HRGMv2_0353_1 | HRGMv2_0353_1_298 | 357267 | 359402 | - | B12-binding |
| pfam | HRGMv2_0353_1 | HRGMv2_0353_1_299 | 359436 | 361301 | - | MM_CoA_mutase |
| TC | HRGMv2_0353_1 | HRGMv2_0353_1_300 | 361475 | 362839 | - | 2.A.22.5.3 |
Gene ID: HRGMv2_0353_1_286
Type: CAZyme
Location: 343296 - 344285 (-)
Type: CAZyme
Location: 343296 - 344285 (-)
Gene ID: HRGMv2_0353_1_287
Type: pfam
Location: 344278 - 345177 (-)
Type: pfam
Location: 344278 - 345177 (-)
Gene ID: HRGMv2_0353_1_288
Type: pfam
Location: 345174 - 346508 (-)
Type: pfam
Location: 345174 - 346508 (-)
Gene ID: HRGMv2_0353_1_289
Type: CAZyme
Location: 346505 - 348547 (-)
Type: CAZyme
Location: 346505 - 348547 (-)
Gene ID: HRGMv2_0353_1_290
Type: pfam
Location: 348706 - 349410 (-)
Type: pfam
Location: 348706 - 349410 (-)
Gene ID: HRGMv2_0353_1_291
Type: CAZyme
Location: 349398 - 351326 (-)
Type: CAZyme
Location: 349398 - 351326 (-)
Gene ID: HRGMv2_0353_1_292
Type:
Location: 351428 - 351928 (+)
Type:
Location: 351428 - 351928 (+)
Gene ID: HRGMv2_0353_1_293
Type: pfam
Location: 351917 - 352879 (-)
Type: pfam
Location: 351917 - 352879 (-)
Gene ID: HRGMv2_0353_1_294
Type: TC
Location: 353108 - 353806 (+)
Type: TC
Location: 353108 - 353806 (+)
Gene ID: HRGMv2_0353_1_295
Type: STP
Location: 353847 - 354707 (-)
Type: STP
Location: 353847 - 354707 (-)
Gene ID: HRGMv2_0353_1_296
Type: pfam
Location: 354891 - 356198 (-)
Type: pfam
Location: 354891 - 356198 (-)
Gene ID: HRGMv2_0353_1_297
Type: TC
Location: 356195 - 357142 (-)
Type: TC
Location: 356195 - 357142 (-)
Gene ID: HRGMv2_0353_1_298
Type: STP
Location: 357267 - 359402 (-)
Type: STP
Location: 357267 - 359402 (-)
Gene ID: HRGMv2_0353_1_299
Type: pfam
Location: 359436 - 361301 (-)
Type: pfam
Location: 359436 - 361301 (-)
Gene ID: HRGMv2_0353_1_300
Type: TC
Location: 361475 - 362839 (-)
Type: TC
Location: 361475 - 362839 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
CAG-1031
Species
CAG-1031 sp900752535
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.