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Cluster: HRGMv2_0343_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0343_2 HRGMv2_0343_2_147 179213 180775 + 3.B.1.1.2
pfam HRGMv2_0343_2 HRGMv2_0343_2_148 180788 181129 + OAD_gamma
pfam HRGMv2_0343_2 HRGMv2_0343_2_149 181144 181605 + Biotin_lipoyl | Biotin_lipoyl_2
TC HRGMv2_0343_2 HRGMv2_0343_2_150 181612 182817 + 3.B.1.1.2
CAZyme HRGMv2_0343_2 HRGMv2_0343_2_151 182996 185449 + GH77
NULL(UNKNOWN) HRGMv2_0343_2 HRGMv2_0343_2_152 185492 185884 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0343_2 HRGMv2_0343_2_153 186233 187870 - 4.C.1.1.7
Gene ID: HRGMv2_0343_2_147
Type: TC
Location: 179213 - 180775 (+)
Gene ID: HRGMv2_0343_2_148
Type: pfam
Location: 180788 - 181129 (+)
Gene ID: HRGMv2_0343_2_149
Type: pfam
Location: 181144 - 181605 (+)
Gene ID: HRGMv2_0343_2_150
Type: TC
Location: 181612 - 182817 (+)
Gene ID: HRGMv2_0343_2_151
Type: CAZyme
Location: 182996 - 185449 (+)
Gene ID: HRGMv2_0343_2_152
Type:
Location: 185492 - 185884 (-)
Gene ID: HRGMv2_0343_2_153
Type: TC
Location: 186233 - 187870 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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