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Cluster: HRGMv2_0341_CGC44

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0341_22 HRGMv2_0341_22_1 1 780 + GH77
NULL(UNKNOWN) HRGMv2_0341_22 HRGMv2_0341_22_2 1043 1183 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0341_22 HRGMv2_0341_22_3 1198 3111 - 8.A.46.2.2
TC HRGMv2_0341_22 HRGMv2_0341_22_4 3128 6553 - 1.B.14.6.2
NULL(UNKNOWN) HRGMv2_0341_22 HRGMv2_0341_22_5 6643 6777 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0341_22 HRGMv2_0341_22_6 7165 9366 + Patatin | Omp85_2
TC HRGMv2_0341_22 HRGMv2_0341_22_7 9377 9928 - 2.A.51.1.6
TC HRGMv2_0341_22 HRGMv2_0341_22_8 9985 10527 - 2.A.51.1.6
TC HRGMv2_0341_22 HRGMv2_0341_22_9 10527 12122 - 9.B.174.1.1
Gene ID: HRGMv2_0341_22_1
Type: CAZyme
Location: 1 - 780 (+)
Gene ID: HRGMv2_0341_22_2
Type:
Location: 1043 - 1183 (-)
Gene ID: HRGMv2_0341_22_3
Type: TC
Location: 1198 - 3111 (-)
Gene ID: HRGMv2_0341_22_4
Type: TC
Location: 3128 - 6553 (-)
Gene ID: HRGMv2_0341_22_5
Type:
Location: 6643 - 6777 (-)
Gene ID: HRGMv2_0341_22_6
Type: pfam
Location: 7165 - 9366 (+)
Gene ID: HRGMv2_0341_22_7
Type: TC
Location: 9377 - 9928 (-)
Gene ID: HRGMv2_0341_22_8
Type: TC
Location: 9985 - 10527 (-)
Gene ID: HRGMv2_0341_22_9
Type: TC
Location: 10527 - 12122 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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