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Cluster: HRGMv2_0339_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0339_1 HRGMv2_0339_1_286 339569 341539 + 3.A.25.2.1
pfam HRGMv2_0339_1 HRGMv2_0339_1_287 341520 342368 + CTP_transf_1
pfam HRGMv2_0339_1 HRGMv2_0339_1_288 342394 343071 + PS_Dcarbxylase
TC HRGMv2_0339_1 HRGMv2_0339_1_289 343111 344211 + 2.A.86.1.8
CAZyme HRGMv2_0339_1 HRGMv2_0339_1_290 344282 345781 + CBM91 | GH43_9
CAZyme HRGMv2_0339_1 HRGMv2_0339_1_291 345839 347266 + CE20
pfam HRGMv2_0339_1 HRGMv2_0339_1_292 347357 348208 - adh_short | adh_short_C2
pfam HRGMv2_0339_1 HRGMv2_0339_1_293 348466 349401 - TonB_C
CAZyme HRGMv2_0339_1 HRGMv2_0339_1_294 349435 350823 + CE11
Gene ID: HRGMv2_0339_1_286
Type: TC
Location: 339569 - 341539 (+)
Gene ID: HRGMv2_0339_1_287
Type: pfam
Location: 341520 - 342368 (+)
Gene ID: HRGMv2_0339_1_288
Type: pfam
Location: 342394 - 343071 (+)
Gene ID: HRGMv2_0339_1_289
Type: TC
Location: 343111 - 344211 (+)
Gene ID: HRGMv2_0339_1_290
Type: CAZyme
Location: 344282 - 345781 (+)
Gene ID: HRGMv2_0339_1_291
Type: CAZyme
Location: 345839 - 347266 (+)
Gene ID: HRGMv2_0339_1_292
Type: pfam
Location: 347357 - 348208 (-)
Gene ID: HRGMv2_0339_1_293
Type: pfam
Location: 348466 - 349401 (-)
Gene ID: HRGMv2_0339_1_294
Type: CAZyme
Location: 349435 - 350823 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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