Cluster: HRGMv2_0339_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0339
- CGC Family ID: CGCFAM_01971
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0339_1 | HRGMv2_0339_1_194 | 235080 | 236681 | - | GH20 |
| CAZyme | HRGMv2_0339_1 | HRGMv2_0339_1_195 | 236738 | 237724 | - | GH32 |
| pfam | HRGMv2_0339_1 | HRGMv2_0339_1_196 | 237747 | 238181 | - | Biotin_lipoyl | Biotin_lipoyl_2 |
| TC | HRGMv2_0339_1 | HRGMv2_0339_1_197 | 238453 | 240015 | - | 3.B.1.1.2 |
| STP | HRGMv2_0339_1 | HRGMv2_0339_1_198 | 240035 | 240445 | - | Glyoxalase |
| TC | HRGMv2_0339_1 | HRGMv2_0339_1_199 | 240515 | 241669 | - | 9.B.97.1.2 |
Gene ID: HRGMv2_0339_1_194
Type: CAZyme
Location: 235080 - 236681 (-)
Type: CAZyme
Location: 235080 - 236681 (-)
Gene ID: HRGMv2_0339_1_195
Type: CAZyme
Location: 236738 - 237724 (-)
Type: CAZyme
Location: 236738 - 237724 (-)
Gene ID: HRGMv2_0339_1_196
Type: pfam
Location: 237747 - 238181 (-)
Type: pfam
Location: 237747 - 238181 (-)
Gene ID: HRGMv2_0339_1_197
Type: TC
Location: 238453 - 240015 (-)
Type: TC
Location: 238453 - 240015 (-)
Gene ID: HRGMv2_0339_1_198
Type: STP
Location: 240035 - 240445 (-)
Type: STP
Location: 240035 - 240445 (-)
Gene ID: HRGMv2_0339_1_199
Type: TC
Location: 240515 - 241669 (-)
Type: TC
Location: 240515 - 241669 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp944323075
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.