Cluster: HRGMv2_0339_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0339
- CGC Family ID: CGCFAM_08971
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0339_1 | HRGMv2_0339_1_164 | 188958 | 191363 | + | GH95 |
| pfam | HRGMv2_0339_1 | HRGMv2_0339_1_165 | 191532 | 191981 | - | YqeY |
| STP | HRGMv2_0339_1 | HRGMv2_0339_1_166 | 192040 | 194004 | - | HATPase_c |
| TC | HRGMv2_0339_1 | HRGMv2_0339_1_167 | 194142 | 194882 | - | 3.A.1.140.1 |
Gene ID: HRGMv2_0339_1_164
Type: CAZyme
Location: 188958 - 191363 (+)
Type: CAZyme
Location: 188958 - 191363 (+)
Gene ID: HRGMv2_0339_1_165
Type: pfam
Location: 191532 - 191981 (-)
Type: pfam
Location: 191532 - 191981 (-)
Gene ID: HRGMv2_0339_1_166
Type: STP
Location: 192040 - 194004 (-)
Type: STP
Location: 192040 - 194004 (-)
Gene ID: HRGMv2_0339_1_167
Type: TC
Location: 194142 - 194882 (-)
Type: TC
Location: 194142 - 194882 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp944323075
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.