Cluster: HRGMv2_0339_CGC41
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0339
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0339_8 | HRGMv2_0339_8_66 | 71561 | 72796 | - | GH5_57 |
| CAZyme | HRGMv2_0339_8 | HRGMv2_0339_8_67 | 73058 | 75088 | - | GH13_8 |
| TC | HRGMv2_0339_8 | HRGMv2_0339_8_68 | 75206 | 76729 | + | 2.A.17.4.2 |
| pfam | HRGMv2_0339_8 | HRGMv2_0339_8_69 | 76784 | 77560 | + | Lactamase_B | Lactamase_B_2 |
| STP | HRGMv2_0339_8 | HRGMv2_0339_8_70 | 77566 | 79680 | + | B12-binding |
| CAZyme | HRGMv2_0339_8 | HRGMv2_0339_8_71 | 79717 | 81825 | + | GH141 |
Gene ID: HRGMv2_0339_8_66
Type: CAZyme
Location: 71561 - 72796 (-)
Type: CAZyme
Location: 71561 - 72796 (-)
Gene ID: HRGMv2_0339_8_67
Type: CAZyme
Location: 73058 - 75088 (-)
Type: CAZyme
Location: 73058 - 75088 (-)
Gene ID: HRGMv2_0339_8_68
Type: TC
Location: 75206 - 76729 (+)
Type: TC
Location: 75206 - 76729 (+)
Gene ID: HRGMv2_0339_8_69
Type: pfam
Location: 76784 - 77560 (+)
Type: pfam
Location: 76784 - 77560 (+)
Gene ID: HRGMv2_0339_8_70
Type: STP
Location: 77566 - 79680 (+)
Type: STP
Location: 77566 - 79680 (+)
Gene ID: HRGMv2_0339_8_71
Type: CAZyme
Location: 79717 - 81825 (+)
Type: CAZyme
Location: 79717 - 81825 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp944323075
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.