Cluster: HRGMv2_0339_CGC39
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0339
- CGC Family ID: CGCFAM_02163
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0339_6 | HRGMv2_0339_6_127 | 146974 | 147696 | - | 1.B.42.1.2 |
| TC | HRGMv2_0339_6 | HRGMv2_0339_6_128 | 147808 | 150000 | + | 2.A.16.2.2 |
| NULL(UNKNOWN) | HRGMv2_0339_6 | HRGMv2_0339_6_129 | 150104 | 151345 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0339_6 | HRGMv2_0339_6_130 | 151364 | 152161 | + | RrnaAD |
| CAZyme | HRGMv2_0339_6 | HRGMv2_0339_6_131 | 152173 | 155076 | + | CBM67 | GH78 |
Gene ID: HRGMv2_0339_6_127
Type: TC
Location: 146974 - 147696 (-)
Type: TC
Location: 146974 - 147696 (-)
Gene ID: HRGMv2_0339_6_128
Type: TC
Location: 147808 - 150000 (+)
Type: TC
Location: 147808 - 150000 (+)
Gene ID: HRGMv2_0339_6_129
Type:
Location: 150104 - 151345 (+)
Type:
Location: 150104 - 151345 (+)
Gene ID: HRGMv2_0339_6_130
Type: pfam
Location: 151364 - 152161 (+)
Type: pfam
Location: 151364 - 152161 (+)
Gene ID: HRGMv2_0339_6_131
Type: CAZyme
Location: 152173 - 155076 (+)
Type: CAZyme
Location: 152173 - 155076 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp944323075
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.