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Cluster: HRGMv2_0339_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0339_6 HRGMv2_0339_6_74 88144 88728 - 3.D.1.8.1
NULL(UNKNOWN) HRGMv2_0339_6 HRGMv2_0339_6_75 88861 90159 - NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_0339_6 HRGMv2_0339_6_76 90173 93169 + Response_reg
TC HRGMv2_0339_6 HRGMv2_0339_6_77 93280 94737 - 3.A.1.15.11
pfam HRGMv2_0339_6 HRGMv2_0339_6_78 94834 95706 - ApbE
NULL(UNKNOWN) HRGMv2_0339_6 HRGMv2_0339_6_79 95713 95976 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0339_6 HRGMv2_0339_6_80 95992 97266 - GH177
Gene ID: HRGMv2_0339_6_74
Type: TC
Location: 88144 - 88728 (-)
Gene ID: HRGMv2_0339_6_75
Type:
Location: 88861 - 90159 (-)
Gene ID: HRGMv2_0339_6_76
Type: STP
Location: 90173 - 93169 (+)
Gene ID: HRGMv2_0339_6_77
Type: TC
Location: 93280 - 94737 (-)
Gene ID: HRGMv2_0339_6_78
Type: pfam
Location: 94834 - 95706 (-)
Gene ID: HRGMv2_0339_6_79
Type:
Location: 95713 - 95976 (-)
Gene ID: HRGMv2_0339_6_80
Type: CAZyme
Location: 95992 - 97266 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0339_6_74 vegetarian > omnivore 1.22692 0.03944
HRGMv2_0339_6_74 vegetarian > vegan 1.16779 0.02785

🧭 Explore Read Mapping of CGC

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