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Cluster: HRGMv2_0339_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0339_5 HRGMv2_0339_5_174 205447 206979 + 3.B.1.1.2
pfam HRGMv2_0339_5 HRGMv2_0339_5_175 207220 210780 + DUF6562
peptidase HRGMv2_0339_5 HRGMv2_0339_5_176 210935 212233 + C11.UPW
TC HRGMv2_0339_5 HRGMv2_0339_5_177 212352 213716 + 9.B.171.1.2
pfam HRGMv2_0339_5 HRGMv2_0339_5_178 213728 214159 + DUF6562
TC HRGMv2_0339_5 HRGMv2_0339_5_179 214185 215342 - 2.A.1.7.16
STP HRGMv2_0339_5 HRGMv2_0339_5_180 215415 216005 - SIS
pfam HRGMv2_0339_5 HRGMv2_0339_5_181 216011 216985 - ROK
CAZyme HRGMv2_0339_5 HRGMv2_0339_5_182 216993 219401 - GH2
CAZyme HRGMv2_0339_5 HRGMv2_0339_5_183 219452 222109 - CBM67 | GH78
Gene ID: HRGMv2_0339_5_174
Type: TC
Location: 205447 - 206979 (+)
Gene ID: HRGMv2_0339_5_175
Type: pfam
Location: 207220 - 210780 (+)
Gene ID: HRGMv2_0339_5_176
Type: peptidase
Location: 210935 - 212233 (+)
Gene ID: HRGMv2_0339_5_177
Type: TC
Location: 212352 - 213716 (+)
Gene ID: HRGMv2_0339_5_178
Type: pfam
Location: 213728 - 214159 (+)
Gene ID: HRGMv2_0339_5_179
Type: TC
Location: 214185 - 215342 (-)
Gene ID: HRGMv2_0339_5_180
Type: STP
Location: 215415 - 216005 (-)
Gene ID: HRGMv2_0339_5_181
Type: pfam
Location: 216011 - 216985 (-)
Gene ID: HRGMv2_0339_5_182
Type: CAZyme
Location: 216993 - 219401 (-)
Gene ID: HRGMv2_0339_5_183
Type: CAZyme
Location: 219452 - 222109 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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