Cluster: HRGMv2_0339_CGC31
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0339
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0339_5 | HRGMv2_0339_5_4 | 1728 | 3593 | + | GH43_35 |
| pfam | HRGMv2_0339_5 | HRGMv2_0339_5_5 | 3667 | 4830 | + | Acyl_transf_3 |
| TC | HRGMv2_0339_5 | HRGMv2_0339_5_6 | 4969 | 7272 | - | 1.B.14.1.4 |
Gene ID: HRGMv2_0339_5_4
Type: CAZyme
Location: 1728 - 3593 (+)
Type: CAZyme
Location: 1728 - 3593 (+)
Gene ID: HRGMv2_0339_5_5
Type: pfam
Location: 3667 - 4830 (+)
Type: pfam
Location: 3667 - 4830 (+)
Gene ID: HRGMv2_0339_5_6
Type: TC
Location: 4969 - 7272 (-)
Type: TC
Location: 4969 - 7272 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp944323075
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.