Cluster: HRGMv2_0339_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0339
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0339_1 | HRGMv2_0339_1_140 | 160672 | 163251 | + | CBM67 | GH78 |
| pfam | HRGMv2_0339_1 | HRGMv2_0339_1_141 | 163494 | 163715 | + | YjbR |
| TC | HRGMv2_0339_1 | HRGMv2_0339_1_142 | 163879 | 164940 | - | 2.A.98.1.3 |
Gene ID: HRGMv2_0339_1_140
Type: CAZyme
Location: 160672 - 163251 (+)
Type: CAZyme
Location: 160672 - 163251 (+)
Gene ID: HRGMv2_0339_1_141
Type: pfam
Location: 163494 - 163715 (+)
Type: pfam
Location: 163494 - 163715 (+)
Gene ID: HRGMv2_0339_1_142
Type: TC
Location: 163879 - 164940 (-)
Type: TC
Location: 163879 - 164940 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp944323075
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.