Cluster: HRGMv2_0339_CGC26
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0339
- CGC Family ID: CGCFAM_05761
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0339_4 | HRGMv2_0339_4_14 | 17572 | 18240 | + | 9.B.104.1.2 |
| pfam | HRGMv2_0339_4 | HRGMv2_0339_4_15 | 18271 | 19407 | + | Exo_endo_phos |
| CAZyme | HRGMv2_0339_4 | HRGMv2_0339_4_16 | 19898 | 22975 | - | GH106 |
| CAZyme | HRGMv2_0339_4 | HRGMv2_0339_4_17 | 23155 | 25620 | + | GH78 |
Gene ID: HRGMv2_0339_4_14
Type: TC
Location: 17572 - 18240 (+)
Type: TC
Location: 17572 - 18240 (+)
Gene ID: HRGMv2_0339_4_15
Type: pfam
Location: 18271 - 19407 (+)
Type: pfam
Location: 18271 - 19407 (+)
Gene ID: HRGMv2_0339_4_16
Type: CAZyme
Location: 19898 - 22975 (-)
Type: CAZyme
Location: 19898 - 22975 (-)
Gene ID: HRGMv2_0339_4_17
Type: CAZyme
Location: 23155 - 25620 (+)
Type: CAZyme
Location: 23155 - 25620 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp944323075
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.