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Cluster: HRGMv2_0339_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0339_3 HRGMv2_0339_3_222 279281 282325 + 1.B.14.6.1
pfam HRGMv2_0339_3 HRGMv2_0339_3_223 282341 283990 + SusD_RagB | SusD-like_3
CAZyme HRGMv2_0339_3 HRGMv2_0339_3_224 283995 285641 + GH144
CAZyme HRGMv2_0339_3 HRGMv2_0339_3_225 285648 287936 + GH3
NULL(UNKNOWN) HRGMv2_0339_3 HRGMv2_0339_3_226 288067 289776 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0339_3 HRGMv2_0339_3_227 289854 290642 - DAC | CdaA_N
TC HRGMv2_0339_3 HRGMv2_0339_3_228 290729 293758 - 2.A.6.4.3
NULL(UNKNOWN) HRGMv2_0339_3 HRGMv2_0339_3_229 293984 294238 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0339_3 HRGMv2_0339_3_230 294529 295524 + 2.A.4.7.7
Gene ID: HRGMv2_0339_3_222
Type: TC
Location: 279281 - 282325 (+)
Gene ID: HRGMv2_0339_3_223
Type: pfam
Location: 282341 - 283990 (+)
Gene ID: HRGMv2_0339_3_224
Type: CAZyme
Location: 283995 - 285641 (+)
Gene ID: HRGMv2_0339_3_225
Type: CAZyme
Location: 285648 - 287936 (+)
Gene ID: HRGMv2_0339_3_226
Type:
Location: 288067 - 289776 (-)
Gene ID: HRGMv2_0339_3_227
Type: pfam
Location: 289854 - 290642 (-)
Gene ID: HRGMv2_0339_3_228
Type: TC
Location: 290729 - 293758 (-)
Gene ID: HRGMv2_0339_3_229
Type:
Location: 293984 - 294238 (-)
Gene ID: HRGMv2_0339_3_230
Type: TC
Location: 294529 - 295524 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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