Cluster: HRGMv2_0339_CGC24
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0339
- CGC Family ID: CGCFAM_01784
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0339_3 | HRGMv2_0339_3_179 | 220472 | 221164 | + | GT51 |
| pfam | HRGMv2_0339_3 | HRGMv2_0339_3_180 | 221219 | 221815 | - | DUF4476 |
| TC | HRGMv2_0339_3 | HRGMv2_0339_3_181 | 222005 | 223375 | + | 2.A.66.1.32 |
| CAZyme | HRGMv2_0339_3 | HRGMv2_0339_3_182 | 223537 | 226305 | + | CBM67 | GH78 |
Gene ID: HRGMv2_0339_3_179
Type: CAZyme
Location: 220472 - 221164 (+)
Type: CAZyme
Location: 220472 - 221164 (+)
Gene ID: HRGMv2_0339_3_180
Type: pfam
Location: 221219 - 221815 (-)
Type: pfam
Location: 221219 - 221815 (-)
Gene ID: HRGMv2_0339_3_181
Type: TC
Location: 222005 - 223375 (+)
Type: TC
Location: 222005 - 223375 (+)
Gene ID: HRGMv2_0339_3_182
Type: CAZyme
Location: 223537 - 226305 (+)
Type: CAZyme
Location: 223537 - 226305 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp944323075
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.