Cluster: HRGMv2_0339_CGC17
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0339
- CGC Family ID: CGCFAM_05215
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0339_2 | HRGMv2_0339_2_324 | 393031 | 393942 | - | GT2 |
| pfam | HRGMv2_0339_2 | HRGMv2_0339_2_325 | 394018 | 395097 | - | APH |
| CAZyme | HRGMv2_0339_2 | HRGMv2_0339_2_326 | 395167 | 396582 | - | GH109 |
| NULL(UNKNOWN) | HRGMv2_0339_2 | HRGMv2_0339_2_327 | 396625 | 396810 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0339_2 | HRGMv2_0339_2_328 | 396759 | 397763 | - | Gp_dh_N | Gp_dh_C |
| TC | HRGMv2_0339_2 | HRGMv2_0339_2_329 | 397948 | 398706 | - | 3.A.1.27.5 |
| TC | HRGMv2_0339_2 | HRGMv2_0339_2_330 | 398709 | 399452 | - | 3.A.1.27.2 |
Gene ID: HRGMv2_0339_2_324
Type: CAZyme
Location: 393031 - 393942 (-)
Type: CAZyme
Location: 393031 - 393942 (-)
Gene ID: HRGMv2_0339_2_325
Type: pfam
Location: 394018 - 395097 (-)
Type: pfam
Location: 394018 - 395097 (-)
Gene ID: HRGMv2_0339_2_326
Type: CAZyme
Location: 395167 - 396582 (-)
Type: CAZyme
Location: 395167 - 396582 (-)
Gene ID: HRGMv2_0339_2_327
Type:
Location: 396625 - 396810 (+)
Type:
Location: 396625 - 396810 (+)
Gene ID: HRGMv2_0339_2_328
Type: pfam
Location: 396759 - 397763 (-)
Type: pfam
Location: 396759 - 397763 (-)
Gene ID: HRGMv2_0339_2_329
Type: TC
Location: 397948 - 398706 (-)
Type: TC
Location: 397948 - 398706 (-)
Gene ID: HRGMv2_0339_2_330
Type: TC
Location: 398709 - 399452 (-)
Type: TC
Location: 398709 - 399452 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp944323075
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.