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Cluster: HRGMv2_0339_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0339_2 HRGMv2_0339_2_264 325842 327203 - GH177
TC HRGMv2_0339_2 HRGMv2_0339_2_265 327223 328812 - 9.A.25.1.1
TC HRGMv2_0339_2 HRGMv2_0339_2_266 329237 330103 - 3.A.2.1.5
TC HRGMv2_0339_2 HRGMv2_0339_2_267 330106 331686 - 3.A.2.1.4
pfam HRGMv2_0339_2 HRGMv2_0339_2_268 331713 332267 - OSCP
pfam HRGMv2_0339_2 HRGMv2_0339_2_269 332272 332775 - ATP-synt_B | YMF19
TC HRGMv2_0339_2 HRGMv2_0339_2_270 332805 333053 - 3.A.2.1.6
TC HRGMv2_0339_2 HRGMv2_0339_2_271 333142 334224 - 3.A.2.1.7
NULL(UNKNOWN) HRGMv2_0339_2 HRGMv2_0339_2_272 334217 334624 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0339_2 HRGMv2_0339_2_273 334650 334892 - 3.A.2.1.6
TC HRGMv2_0339_2 HRGMv2_0339_2_274 334889 336433 - 3.A.2.1.7
Gene ID: HRGMv2_0339_2_264
Type: CAZyme
Location: 325842 - 327203 (-)
Gene ID: HRGMv2_0339_2_265
Type: TC
Location: 327223 - 328812 (-)
Gene ID: HRGMv2_0339_2_266
Type: TC
Location: 329237 - 330103 (-)
Gene ID: HRGMv2_0339_2_267
Type: TC
Location: 330106 - 331686 (-)
Gene ID: HRGMv2_0339_2_268
Type: pfam
Location: 331713 - 332267 (-)
Gene ID: HRGMv2_0339_2_269
Type: pfam
Location: 332272 - 332775 (-)
Gene ID: HRGMv2_0339_2_270
Type: TC
Location: 332805 - 333053 (-)
Gene ID: HRGMv2_0339_2_271
Type: TC
Location: 333142 - 334224 (-)
Gene ID: HRGMv2_0339_2_272
Type:
Location: 334217 - 334624 (-)
Gene ID: HRGMv2_0339_2_273
Type: TC
Location: 334650 - 334892 (-)
Gene ID: HRGMv2_0339_2_274
Type: TC
Location: 334889 - 336433 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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