Cluster: HRGMv2_0339_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0339
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0339_2 | HRGMv2_0339_2_160 | 185673 | 186833 | - | GT4 |
| pfam | HRGMv2_0339_2 | HRGMv2_0339_2_161 | 186830 | 188347 | - | GH3 | GH3_M | GH3_C |
| TC | HRGMv2_0339_2 | HRGMv2_0339_2_162 | 188356 | 189696 | - | 2.A.38.1.1 |
| NULL(UNKNOWN) | HRGMv2_0339_2 | HRGMv2_0339_2_163 | 189876 | 190166 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0339_2 | HRGMv2_0339_2_164 | 190178 | 190939 | + | GT2 |
Gene ID: HRGMv2_0339_2_160
Type: CAZyme
Location: 185673 - 186833 (-)
Type: CAZyme
Location: 185673 - 186833 (-)
Gene ID: HRGMv2_0339_2_161
Type: pfam
Location: 186830 - 188347 (-)
Type: pfam
Location: 186830 - 188347 (-)
Gene ID: HRGMv2_0339_2_162
Type: TC
Location: 188356 - 189696 (-)
Type: TC
Location: 188356 - 189696 (-)
Gene ID: HRGMv2_0339_2_163
Type:
Location: 189876 - 190166 (+)
Type:
Location: 189876 - 190166 (+)
Gene ID: HRGMv2_0339_2_164
Type: CAZyme
Location: 190178 - 190939 (+)
Type: CAZyme
Location: 190178 - 190939 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp944323075
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.