Cluster: HRGMv2_0339_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0339
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0339_2 | HRGMv2_0339_2_44 | 46626 | 47534 | - | 2.A.7.3.57 |
| sulfatase | HRGMv2_0339_2 | HRGMv2_0339_2_45 | 47690 | 48826 | + | S1_22 |
| CAZyme | HRGMv2_0339_2 | HRGMv2_0339_2_46 | 48971 | 50365 | - | GH175 |
| pfam | HRGMv2_0339_2 | HRGMv2_0339_2_47 | 50679 | 51773 | - | LptF_LptG |
| pfam | HRGMv2_0339_2 | HRGMv2_0339_2_48 | 51863 | 52993 | - | TGT |
| CAZyme | HRGMv2_0339_2 | HRGMv2_0339_2_49 | 53152 | 54333 | + | GT2 |
Gene ID: HRGMv2_0339_2_44
Type: TC
Location: 46626 - 47534 (-)
Type: TC
Location: 46626 - 47534 (-)
Gene ID: HRGMv2_0339_2_45
Type: sulfatase
Location: 47690 - 48826 (+)
Type: sulfatase
Location: 47690 - 48826 (+)
Gene ID: HRGMv2_0339_2_46
Type: CAZyme
Location: 48971 - 50365 (-)
Type: CAZyme
Location: 48971 - 50365 (-)
Gene ID: HRGMv2_0339_2_47
Type: pfam
Location: 50679 - 51773 (-)
Type: pfam
Location: 50679 - 51773 (-)
Gene ID: HRGMv2_0339_2_48
Type: pfam
Location: 51863 - 52993 (-)
Type: pfam
Location: 51863 - 52993 (-)
Gene ID: HRGMv2_0339_2_49
Type: CAZyme
Location: 53152 - 54333 (+)
Type: CAZyme
Location: 53152 - 54333 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp944323075
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.