Cluster: HRGMv2_0339_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0339
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0339_1 | HRGMv2_0339_1_38 | 43899 | 46187 | - | GH92 |
| NULL(UNKNOWN) | HRGMv2_0339_1 | HRGMv2_0339_1_39 | 46275 | 47003 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0339_1 | HRGMv2_0339_1_40 | 47260 | 47769 | + | AhpC-TSA | Redoxin |
| TC | HRGMv2_0339_1 | HRGMv2_0339_1_41 | 47976 | 50294 | - | 2.A.37.4.2 |
Gene ID: HRGMv2_0339_1_38
Type: CAZyme
Location: 43899 - 46187 (-)
Type: CAZyme
Location: 43899 - 46187 (-)
Gene ID: HRGMv2_0339_1_39
Type:
Location: 46275 - 47003 (-)
Type:
Location: 46275 - 47003 (-)
Gene ID: HRGMv2_0339_1_40
Type: pfam
Location: 47260 - 47769 (+)
Type: pfam
Location: 47260 - 47769 (+)
Gene ID: HRGMv2_0339_1_41
Type: TC
Location: 47976 - 50294 (-)
Type: TC
Location: 47976 - 50294 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp944323075
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.