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Cluster: HRGMv2_0335_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0335_2 HRGMv2_0335_2_129 156019 158076 - GH20
CAZyme HRGMv2_0335_2 HRGMv2_0335_2_130 158480 159910 + GH29
CAZyme HRGMv2_0335_2 HRGMv2_0335_2_131 159924 161045 + GH105
CAZyme HRGMv2_0335_2 HRGMv2_0335_2_132 161042 163147 + GH2
pfam HRGMv2_0335_2 HRGMv2_0335_2_133 163167 164330 + Acyl_transf_3
NULL(UNKNOWN) HRGMv2_0335_2 HRGMv2_0335_2_134 164428 166206 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0335_2 HRGMv2_0335_2_135 166305 167891 + CBM91 | GH43_10
TC HRGMv2_0335_2 HRGMv2_0335_2_136 168117 170720 - 3.A.9.1.2
Gene ID: HRGMv2_0335_2_129
Type: CAZyme
Location: 156019 - 158076 (-)
Gene ID: HRGMv2_0335_2_130
Type: CAZyme
Location: 158480 - 159910 (+)
Gene ID: HRGMv2_0335_2_131
Type: CAZyme
Location: 159924 - 161045 (+)
Gene ID: HRGMv2_0335_2_132
Type: CAZyme
Location: 161042 - 163147 (+)
Gene ID: HRGMv2_0335_2_133
Type: pfam
Location: 163167 - 164330 (+)
Gene ID: HRGMv2_0335_2_134
Type:
Location: 164428 - 166206 (-)
Gene ID: HRGMv2_0335_2_135
Type: CAZyme
Location: 166305 - 167891 (+)
Gene ID: HRGMv2_0335_2_136
Type: TC
Location: 168117 - 170720 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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