dbCAN Logo

Cluster: HRGMv2_0335_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0335_12 HRGMv2_0335_12_26 29532 30686 + 2.A.6.2.44
TC HRGMv2_0335_12 HRGMv2_0335_12_27 30720 33923 + 2.A.6.2.22
TC HRGMv2_0335_12 HRGMv2_0335_12_28 34019 35401 + 2.A.6.2.25
pfam HRGMv2_0335_12 HRGMv2_0335_12_29 35421 36212 + Hexapep | Acetyltransf_11
CAZyme HRGMv2_0335_12 HRGMv2_0335_12_30 36365 37273 + GT2
NULL(UNKNOWN) HRGMv2_0335_12 HRGMv2_0335_12_31 37502 37795 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0335_12 HRGMv2_0335_12_32 37873 40257 - GH3
pfam HRGMv2_0335_12 HRGMv2_0335_12_33 40310 40720 - Thioredoxin | AhpC-TSA | Redoxin | Thioredoxin_8
pfam HRGMv2_0335_12 HRGMv2_0335_12_34 40733 41380 - DUF4369
CAZyme HRGMv2_0335_12 HRGMv2_0335_12_35 41552 42310 + GT2
Gene ID: HRGMv2_0335_12_26
Type: TC
Location: 29532 - 30686 (+)
Gene ID: HRGMv2_0335_12_27
Type: TC
Location: 30720 - 33923 (+)
Gene ID: HRGMv2_0335_12_28
Type: TC
Location: 34019 - 35401 (+)
Gene ID: HRGMv2_0335_12_29
Type: pfam
Location: 35421 - 36212 (+)
Gene ID: HRGMv2_0335_12_30
Type: CAZyme
Location: 36365 - 37273 (+)
Gene ID: HRGMv2_0335_12_31
Type:
Location: 37502 - 37795 (-)
Gene ID: HRGMv2_0335_12_32
Type: CAZyme
Location: 37873 - 40257 (-)
Gene ID: HRGMv2_0335_12_33
Type: pfam
Location: 40310 - 40720 (-)
Gene ID: HRGMv2_0335_12_34
Type: pfam
Location: 40733 - 41380 (-)
Gene ID: HRGMv2_0335_12_35
Type: CAZyme
Location: 41552 - 42310 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List