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Cluster: HRGMv2_0335_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0335_10 HRGMv2_0335_10_30 35224 36240 - GT94
CAZyme HRGMv2_0335_10 HRGMv2_0335_10_31 36250 37221 - GT2
CAZyme HRGMv2_0335_10 HRGMv2_0335_10_32 37227 38180 - GT2
TC HRGMv2_0335_10 HRGMv2_0335_10_33 38182 39624 - 2.A.66.2.23
STP HRGMv2_0335_10 HRGMv2_0335_10_34 39808 40749 + Sigma70_r2 | Sigma70_r3 | Sigma70_r4
CAZyme HRGMv2_0335_10 HRGMv2_0335_10_35 40841 42589 - GT83
CAZyme HRGMv2_0335_10 HRGMv2_0335_10_36 42790 43623 + GT2
CAZyme HRGMv2_0335_10 HRGMv2_0335_10_37 43624 44505 - GT14
CAZyme HRGMv2_0335_10 HRGMv2_0335_10_38 44502 45410 - GT2
CAZyme HRGMv2_0335_10 HRGMv2_0335_10_39 45407 46276 - GT11
CAZyme HRGMv2_0335_10 HRGMv2_0335_10_40 46287 47237 - GT2
Gene ID: HRGMv2_0335_10_30
Type: CAZyme
Location: 35224 - 36240 (-)
Gene ID: HRGMv2_0335_10_31
Type: CAZyme
Location: 36250 - 37221 (-)
Gene ID: HRGMv2_0335_10_32
Type: CAZyme
Location: 37227 - 38180 (-)
Gene ID: HRGMv2_0335_10_33
Type: TC
Location: 38182 - 39624 (-)
Gene ID: HRGMv2_0335_10_34
Type: STP
Location: 39808 - 40749 (+)
Gene ID: HRGMv2_0335_10_35
Type: CAZyme
Location: 40841 - 42589 (-)
Gene ID: HRGMv2_0335_10_36
Type: CAZyme
Location: 42790 - 43623 (+)
Gene ID: HRGMv2_0335_10_37
Type: CAZyme
Location: 43624 - 44505 (-)
Gene ID: HRGMv2_0335_10_38
Type: CAZyme
Location: 44502 - 45410 (-)
Gene ID: HRGMv2_0335_10_39
Type: CAZyme
Location: 45407 - 46276 (-)
Gene ID: HRGMv2_0335_10_40
Type: CAZyme
Location: 46287 - 47237 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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