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Cluster: HRGMv2_0333_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0333_28 HRGMv2_0333_28_1 203 1402 - GH88
CAZyme HRGMv2_0333_28 HRGMv2_0333_28_2 1424 2836 - GH28
CAZyme HRGMv2_0333_28 HRGMv2_0333_28_3 2839 4668 - GH146
CAZyme HRGMv2_0333_28 HRGMv2_0333_28_4 5604 7946 - GH3
pfam HRGMv2_0333_28 HRGMv2_0333_28_5 8167 9474 - GlcNAc_2-epim | GlcNAc_2-epim
TC HRGMv2_0333_28 HRGMv2_0333_28_6 9464 10858 - 2.A.2.3.6
CAZyme HRGMv2_0333_28 HRGMv2_0333_28_7 10954 12141 - GH130_1
CAZyme HRGMv2_0333_28 HRGMv2_0333_28_8 12171 13319 - GH26
CAZyme HRGMv2_0333_28 HRGMv2_0333_28_9 13994 18184 + CE7 | CE7
TF HRGMv2_0333_28 HRGMv2_0333_28_10 18359 19321 - HTH_AraC | HTH_AraC
CAZyme HRGMv2_0333_28 HRGMv2_0333_28_11 19594 21777 + GH36
Gene ID: HRGMv2_0333_28_1
Type: CAZyme
Location: 203 - 1402 (-)
Gene ID: HRGMv2_0333_28_2
Type: CAZyme
Location: 1424 - 2836 (-)
Gene ID: HRGMv2_0333_28_3
Type: CAZyme
Location: 2839 - 4668 (-)
Gene ID: HRGMv2_0333_28_4
Type: CAZyme
Location: 5604 - 7946 (-)
Gene ID: HRGMv2_0333_28_5
Type: pfam
Location: 8167 - 9474 (-)
Gene ID: HRGMv2_0333_28_6
Type: TC
Location: 9464 - 10858 (-)
Gene ID: HRGMv2_0333_28_7
Type: CAZyme
Location: 10954 - 12141 (-)
Gene ID: HRGMv2_0333_28_8
Type: CAZyme
Location: 12171 - 13319 (-)
Gene ID: HRGMv2_0333_28_9
Type: CAZyme
Location: 13994 - 18184 (+)
Gene ID: HRGMv2_0333_28_10
Type: TF
Location: 18359 - 19321 (-)
Gene ID: HRGMv2_0333_28_11
Type: CAZyme
Location: 19594 - 21777 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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