Cluster: HRGMv2_0333_CGC27
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0333
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0333_20 | HRGMv2_0333_20_37 | 40618 | 42609 | + | 2.A.67.4.2 |
| STP | HRGMv2_0333_20 | HRGMv2_0333_20_38 | 42783 | 44756 | - | HATPase_c |
| CAZyme | HRGMv2_0333_20 | HRGMv2_0333_20_39 | 45135 | 46916 | - | GH66 |
| pfam | HRGMv2_0333_20 | HRGMv2_0333_20_40 | 46921 | 48387 | - | SusE | SusF_SusE | SusF_SusE |
| TC | HRGMv2_0333_20 | HRGMv2_0333_20_41 | 48435 | 49928 | - | 8.A.46.1.3 |
| TC | HRGMv2_0333_20 | HRGMv2_0333_20_42 | 49943 | 52948 | - | 1.B.14.6.1 |
| CAZyme | HRGMv2_0333_20 | HRGMv2_0333_20_43 | 53280 | 55445 | - | GH97 |
Gene ID: HRGMv2_0333_20_37
Type: TC
Location: 40618 - 42609 (+)
Type: TC
Location: 40618 - 42609 (+)
Gene ID: HRGMv2_0333_20_38
Type: STP
Location: 42783 - 44756 (-)
Type: STP
Location: 42783 - 44756 (-)
Gene ID: HRGMv2_0333_20_39
Type: CAZyme
Location: 45135 - 46916 (-)
Type: CAZyme
Location: 45135 - 46916 (-)
Gene ID: HRGMv2_0333_20_40
Type: pfam
Location: 46921 - 48387 (-)
Type: pfam
Location: 46921 - 48387 (-)
Gene ID: HRGMv2_0333_20_41
Type: TC
Location: 48435 - 49928 (-)
Type: TC
Location: 48435 - 49928 (-)
Gene ID: HRGMv2_0333_20_42
Type: TC
Location: 49943 - 52948 (-)
Type: TC
Location: 49943 - 52948 (-)
Gene ID: HRGMv2_0333_20_43
Type: CAZyme
Location: 53280 - 55445 (-)
Type: CAZyme
Location: 53280 - 55445 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900551055
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.