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Cluster: HRGMv2_0329_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0329_5 HRGMv2_0329_5_47 60829 62982 + GH89
pfam HRGMv2_0329_5 HRGMv2_0329_5_48 62993 64135 + Gly_kinase
TC HRGMv2_0329_5 HRGMv2_0329_5_49 64132 65376 + 2.A.8.1.9
CAZyme HRGMv2_0329_5 HRGMv2_0329_5_50 65389 67548 + GH89
TF HRGMv2_0329_5 HRGMv2_0329_5_51 67645 68229 - GerE
CAZyme HRGMv2_0329_5 HRGMv2_0329_5_52 68409 70331 - GH127
pfam HRGMv2_0329_5 HRGMv2_0329_5_53 70335 71345 - URO-D
TC HRGMv2_0329_5 HRGMv2_0329_5_54 71376 72698 - 2.A.1.7.11
CAZyme HRGMv2_0329_5 HRGMv2_0329_5_55 72703 75003 - GH3
Gene ID: HRGMv2_0329_5_47
Type: CAZyme
Location: 60829 - 62982 (+)
Gene ID: HRGMv2_0329_5_48
Type: pfam
Location: 62993 - 64135 (+)
Gene ID: HRGMv2_0329_5_49
Type: TC
Location: 64132 - 65376 (+)
Gene ID: HRGMv2_0329_5_50
Type: CAZyme
Location: 65389 - 67548 (+)
Gene ID: HRGMv2_0329_5_51
Type: TF
Location: 67645 - 68229 (-)
Gene ID: HRGMv2_0329_5_52
Type: CAZyme
Location: 68409 - 70331 (-)
Gene ID: HRGMv2_0329_5_53
Type: pfam
Location: 70335 - 71345 (-)
Gene ID: HRGMv2_0329_5_54
Type: TC
Location: 71376 - 72698 (-)
Gene ID: HRGMv2_0329_5_55
Type: CAZyme
Location: 72703 - 75003 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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