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Cluster: HRGMv2_0329_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0329_2 HRGMv2_0329_2_120 139241 140698 - 2.A.21.3.7
CAZyme HRGMv2_0329_2 HRGMv2_0329_2_121 140785 141951 - GH171
pfam HRGMv2_0329_2 HRGMv2_0329_2_122 142243 143778 - SusD-like | SusD-like_2
TC HRGMv2_0329_2 HRGMv2_0329_2_123 143803 147000 - 1.B.14.6.2
pfam HRGMv2_0329_2 HRGMv2_0329_2_124 147857 148753 + YitT_membrane | DUF2179
STP HRGMv2_0329_2 HRGMv2_0329_2_125 148816 149835 - AAA
CAZyme HRGMv2_0329_2 HRGMv2_0329_2_126 149932 150999 - GT9
Gene ID: HRGMv2_0329_2_120
Type: TC
Location: 139241 - 140698 (-)
Gene ID: HRGMv2_0329_2_121
Type: CAZyme
Location: 140785 - 141951 (-)
Gene ID: HRGMv2_0329_2_122
Type: pfam
Location: 142243 - 143778 (-)
Gene ID: HRGMv2_0329_2_123
Type: TC
Location: 143803 - 147000 (-)
Gene ID: HRGMv2_0329_2_124
Type: pfam
Location: 147857 - 148753 (+)
Gene ID: HRGMv2_0329_2_125
Type: STP
Location: 148816 - 149835 (-)
Gene ID: HRGMv2_0329_2_126
Type: CAZyme
Location: 149932 - 150999 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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