Cluster: HRGMv2_0329_CGC40
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0329
- CGC Family ID: CGCFAM_09613
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0329_37 | HRGMv2_0329_37_12 | 11943 | 13301 | - | 9.A.40.1.2 |
| STP | HRGMv2_0329_37 | HRGMv2_0329_37_13 | 13622 | 14560 | + | PfkB |
| CAZyme | HRGMv2_0329_37 | HRGMv2_0329_37_14 | 14568 | 15650 | - | GT1 |
| pfam | HRGMv2_0329_37 | HRGMv2_0329_37_15 | 15647 | 16393 | - | Metallophos | Metallophos_2 |
| pfam | HRGMv2_0329_37 | HRGMv2_0329_37_16 | 16553 | 17848 | - | OEP | OEP |
| TC | HRGMv2_0329_37 | HRGMv2_0329_37_17 | 17862 | 21023 | - | 2.A.6.2.38 |
Gene ID: HRGMv2_0329_37_12
Type: TC
Location: 11943 - 13301 (-)
Type: TC
Location: 11943 - 13301 (-)
Gene ID: HRGMv2_0329_37_13
Type: STP
Location: 13622 - 14560 (+)
Type: STP
Location: 13622 - 14560 (+)
Gene ID: HRGMv2_0329_37_14
Type: CAZyme
Location: 14568 - 15650 (-)
Type: CAZyme
Location: 14568 - 15650 (-)
Gene ID: HRGMv2_0329_37_15
Type: pfam
Location: 15647 - 16393 (-)
Type: pfam
Location: 15647 - 16393 (-)
Gene ID: HRGMv2_0329_37_16
Type: pfam
Location: 16553 - 17848 (-)
Type: pfam
Location: 16553 - 17848 (-)
Gene ID: HRGMv2_0329_37_17
Type: TC
Location: 17862 - 21023 (-)
Type: TC
Location: 17862 - 21023 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Limisoma
Species
Limisoma sp900544305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.