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Cluster: HRGMv2_0329_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0329_26 HRGMv2_0329_26_16 12808 15012 - 3.A.10.1.10
pfam HRGMv2_0329_26 HRGMv2_0329_26_17 15544 16707 + Epimerase_2
pfam HRGMv2_0329_26 HRGMv2_0329_26_18 16704 17396 + CTP_transf_3
CAZyme HRGMv2_0329_26 HRGMv2_0329_26_19 17421 19055 + CBM93 | GH33
NULL(UNKNOWN) HRGMv2_0329_26 HRGMv2_0329_26_20 19180 19896 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0329_26 HRGMv2_0329_26_21 20052 20993 - TonB_dep_Rec_b-barrel
TC HRGMv2_0329_26 HRGMv2_0329_26_22 21009 22364 - 1.B.14.1.4
NULL(UNKNOWN) HRGMv2_0329_26 HRGMv2_0329_26_23 22366 22527 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0329_26 HRGMv2_0329_26_24 22614 23846 - GT30
Gene ID: HRGMv2_0329_26_16
Type: TC
Location: 12808 - 15012 (-)
Gene ID: HRGMv2_0329_26_17
Type: pfam
Location: 15544 - 16707 (+)
Gene ID: HRGMv2_0329_26_18
Type: pfam
Location: 16704 - 17396 (+)
Gene ID: HRGMv2_0329_26_19
Type: CAZyme
Location: 17421 - 19055 (+)
Gene ID: HRGMv2_0329_26_20
Type:
Location: 19180 - 19896 (-)
Gene ID: HRGMv2_0329_26_21
Type: pfam
Location: 20052 - 20993 (-)
Gene ID: HRGMv2_0329_26_22
Type: TC
Location: 21009 - 22364 (-)
Gene ID: HRGMv2_0329_26_23
Type:
Location: 22366 - 22527 (+)
Gene ID: HRGMv2_0329_26_24
Type: CAZyme
Location: 22614 - 23846 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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