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Cluster: HRGMv2_0329_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0329_25 HRGMv2_0329_25_16 18898 20916 + GH13_8
pfam HRGMv2_0329_25 HRGMv2_0329_25_17 21003 21563 + Flavin_Reduct
pfam HRGMv2_0329_25 HRGMv2_0329_25_18 21652 22779 - GldN
TC HRGMv2_0329_25 HRGMv2_0329_25_19 22835 24394 - 9.A.25.1.1
TC HRGMv2_0329_25 HRGMv2_0329_25_20 24421 25413 - 9.A.25.1.1
TC HRGMv2_0329_25 HRGMv2_0329_25_21 25457 26887 - 9.A.25.1.1
pfam HRGMv2_0329_25 HRGMv2_0329_25_22 26892 27890 - PorP_SprF
TC HRGMv2_0329_25 HRGMv2_0329_25_23 27900 28619 - 1.B.44.1.2
Gene ID: HRGMv2_0329_25_16
Type: CAZyme
Location: 18898 - 20916 (+)
Gene ID: HRGMv2_0329_25_17
Type: pfam
Location: 21003 - 21563 (+)
Gene ID: HRGMv2_0329_25_18
Type: pfam
Location: 21652 - 22779 (-)
Gene ID: HRGMv2_0329_25_19
Type: TC
Location: 22835 - 24394 (-)
Gene ID: HRGMv2_0329_25_20
Type: TC
Location: 24421 - 25413 (-)
Gene ID: HRGMv2_0329_25_21
Type: TC
Location: 25457 - 26887 (-)
Gene ID: HRGMv2_0329_25_22
Type: pfam
Location: 26892 - 27890 (-)
Gene ID: HRGMv2_0329_25_23
Type: TC
Location: 27900 - 28619 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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