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Cluster: HRGMv2_0329_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0329_24 HRGMv2_0329_24_11 9751 10029 + 2.A.124.1.2
TC HRGMv2_0329_24 HRGMv2_0329_24_12 10026 10652 + 2.A.124.1.4
TC HRGMv2_0329_24 HRGMv2_0329_24_13 10727 12526 - 1.A.23.1.4
peptidase HRGMv2_0329_24 HRGMv2_0329_24_14 12684 13451 - S09.UPC
pfam HRGMv2_0329_24 HRGMv2_0329_24_15 13664 15091 + Polysacc_synt | Polysacc_synt_3
TC HRGMv2_0329_24 HRGMv2_0329_24_16 15088 16515 + 9.B.145.1.2
CAZyme HRGMv2_0329_24 HRGMv2_0329_24_17 16512 17732 + GT4
Gene ID: HRGMv2_0329_24_11
Type: TC
Location: 9751 - 10029 (+)
Gene ID: HRGMv2_0329_24_12
Type: TC
Location: 10026 - 10652 (+)
Gene ID: HRGMv2_0329_24_13
Type: TC
Location: 10727 - 12526 (-)
Gene ID: HRGMv2_0329_24_14
Type: peptidase
Location: 12684 - 13451 (-)
Gene ID: HRGMv2_0329_24_15
Type: pfam
Location: 13664 - 15091 (+)
Gene ID: HRGMv2_0329_24_16
Type: TC
Location: 15088 - 16515 (+)
Gene ID: HRGMv2_0329_24_17
Type: CAZyme
Location: 16512 - 17732 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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